Home Description Output legend Molecular Dynamics

MT-ND1 (VA305I) vs. MT-ND3 (NB10D)

Classic molecular dynamics






Essential molecular dynamics

VA305I
-174.8
133.83
NB10D
-220.8
212.33
WT
-268.9
186.29
VA305I-NB10D
-268.9
186.29



Analysis of inter-protein binding energy (H-bonds through the interface)

Legend: position:protein:residue(atom)-position:protein residue(atom)

NB10D
Donor-Acceptor Occupancy (%)
318 MT-ND1:THR(HG1) - 318 MT-ND1:THR(OXT) 15.2
309 MT-ND1:ILE( H ) - 306 MT-ND1:SER( O ) 47.2
306 MT-ND1:SER(HG ) - 302 MT-ND1:MET( O ) 74.0
306 MT-ND1:SER( H ) - 302 MT-ND1:MET( O ) 34.2
305 MT-ND1:VAL( H ) - 301 MT-ND1:LEU( O ) 86.6
302 MT-ND1:MET( H ) - 298 MT-ND1:LEU( O ) 85.8
298 MT-ND1:LEU( H ) - 294 MT-ND1:LEU( O ) 94.6
292 MT-ND1:ASN(D21) - 287 MT-ND1:HIS( O ) 41.6
291 MT-ND1:LYS(HZ1) - 112 MT-ND3:ASP(OD2) 55.4
291 MT-ND1:LYS(HZ1) - 112 MT-ND3:ASP(OD1) 64.6
291 MT-ND1:LYS( H ) - 287 MT-ND1:HIS( O ) 88.4
290 MT-ND1:TRP( H ) - 286 MT-ND1:MET( O ) 95.6
287 MT-ND1:HIS(HE2) - 112 MT-ND3:ASP(OD2) 20.8
287 MT-ND1:HIS(HE2) - 112 MT-ND3:ASP(OD1) 31.4
287 MT-ND1:HIS( H ) - 283 MT-ND1:ASP( O ) 79.8
286 MT-ND1:MET( H ) - 282 MT-ND1:TYR( O ) 89.4
222 MT-ND1:LEU( H ) - 219 MT-ND1:PRO( O ) 86.4
159 MT-ND1:SER(HG ) - 318 MT-ND1:THR(OXT) 32.4
159 MT-ND1:SER( H ) - 154 MT-ND1:LEU( O ) 30.4
155 MT-ND1:LEU( H ) - 151 MT-ND1:LEU( O ) 71.4
151 MT-ND1:LEU( H ) - 147 MT-ND1:ALA( O ) 92.0
148 MT-ND1:ILE( H ) - 144 MT-ND1:VAL( O ) 32.2
147 MT-ND1:ALA( H ) - 143 MT-ND1:GLU( O ) 78.8
144 MT-ND1:VAL( H ) - 141 MT-ND1:SER( O ) 15.0
144 MT-ND1:VAL( H ) - 140 MT-ND1:ILE( O ) 75.2
143 MT-ND1:GLU( H ) - 140 MT-ND1:ILE( O ) 10.2
141 MT-ND1:SER(HG ) - 137 MT-ND1:ALA( O ) 92.6
141 MT-ND1:SER( H ) - 137 MT-ND1:ALA( O ) 63.4
137 MT-ND1:ALA( H ) - 133 MT-ND1:LEU( O ) 98.4
134 MT-ND1:ARG(H21) - 115 MT-ND3:GLU(OE2) 12.6
134 MT-ND1:ARG(H21) - 115 MT-ND3:GLU(OE1) 16.2
133 MT-ND1:LEU( H ) - 129 MT-ND1:LEU( O ) 91.4
129 MT-ND1:LEU( H ) - 125 MT-ND1:SER( O ) 73.8
125 MT-ND1:SER(HG ) - 214 MT-ND1:GLU(OE2) 15.0
125 MT-ND1:SER(HG ) - 127 MT-ND1:TYR( N ) 13.2
124 MT-ND1:ASN(D21) - 65 MT-ND1:THR( O ) 20.2
124 MT-ND1:ASN(D21) - 38 MT-ND3:GLU(OE2) 13.0
124 MT-ND1:ASN(D21) - 38 MT-ND3:GLU(OE1) 17.2
124 MT-ND1:ASN( H ) - 121 MT-ND1:TRP( O ) 50.6
106 MT-ND1:LEU( H ) - 103 MT-ND1:LEU( O ) 25.6
103 MT-ND1:LEU( H ) - 100 MT-ND1:LEU( O ) 10.8
87 MT-ND1:THR(HG1) - 84 MT-ND1:LEU( O ) 13.0
87 MT-ND1:THR(HG1) - 83 MT-ND1:LEU( O ) 85.0
87 MT-ND1:THR( H ) - 84 MT-ND1:LEU( O ) 16.8
87 MT-ND1:THR( H ) - 83 MT-ND1:LEU( O ) 54.8
84 MT-ND1:LEU( H ) - 80 MT-ND1:THR( O ) 81.6
83 MT-ND1:LEU( H ) - 79 MT-ND1:LEU( O ) 86.6
80 MT-ND1:THR(HG1) - 76 MT-ND1:THR( O ) 98.2
80 MT-ND1:THR( H ) - 76 MT-ND1:THR( O ) 94.0
79 MT-ND1:LEU( H ) - 75 MT-ND1:PRO( O ) 78.2
76 MT-ND1:THR(HG1) - 72 MT-ND1:ILE( O ) 76.2
76 MT-ND1:THR(HG1) - 10 MT-ND3:ASN(OD2) 16.6
76 MT-ND1:THR( H ) - 72 MT-ND1:ILE( O ) 25.6
59 MT-ND1:GLU( H ) - 59 MT-ND1:GLU(OE2) 36.4
59 MT-ND1:GLU( H ) - 59 MT-ND1:GLU(OE1) 48.8
10 MT-ND1:ILE( H ) - 6 MT-ND1:LEU( O ) 88.4
7 MT-ND1:LEU( H ) - 3 MT-ND1:MET( O ) 85.2
6 MT-ND1:LEU( H ) - 3 MT-ND1:MET( O ) 12.0
6 MT-ND1:LEU( H ) - 2 MT-ND1:PRO( O ) 44.6
114 MT-ND3:ALA( H ) - 112 MT-ND3:ASP( O ) 10.8
111 MT-ND3:LEU( H ) - 105 MT-ND3:GLU( O ) 17.8
106 MT-ND3:TRP( H ) - 102 MT-ND3:LEU( O ) 89.0
102 MT-ND3:LEU( H ) - 99 MT-ND3:ALA( O ) 17.4
102 MT-ND3:LEU( H ) - 98 MT-ND3:LEU( O ) 12.0
99 MT-ND3:ALA( H ) - 95 MT-ND3:ILE( O ) 81.8
96 MT-ND3:ILE( H ) - 92 MT-ND3:LEU( O ) 86.4
95 MT-ND3:ILE( H ) - 91 MT-ND3:SER( O ) 83.2
92 MT-ND3:LEU( H ) - 88 MT-ND3:VAL( O ) 81.6
91 MT-ND3:SER(HG ) - 88 MT-ND3:VAL( O ) 27.0
91 MT-ND3:SER(HG ) - 87 MT-ND3:MET( O ) 69.4
91 MT-ND3:SER( H ) - 87 MT-ND3:MET( O ) 82.4
88 MT-ND3:VAL( H ) - 84 MT-ND3:LEU( O ) 95.0
80 MT-ND3:GLN(E21) - 315 MT-ND1:PRO( O ) 61.4
80 MT-ND3:GLN(E21) - 76 MT-ND3:PRO( O ) 12.0
80 MT-ND3:GLN( H ) - 77 MT-ND3:TRP( O ) 74.8
79 MT-ND3:LEU( H ) - 75 MT-ND3:LEU( O ) 62.8
75 MT-ND3:LEU( H ) - 72 MT-ND3:LEU( O ) 91.4
73 MT-ND3:LEU( H ) - 69 MT-ND3:ILE( O ) 90.6
72 MT-ND3:LEU( H ) - 69 MT-ND3:ILE( O ) 45.4
69 MT-ND3:ILE( H ) - 65 MT-ND3:PHE( O ) 97.0
66 MT-ND3:ASP( H ) - 62 MT-ND3:PHE( O ) 91.8
65 MT-ND3:PHE( H ) - 61 MT-ND3:THR( O ) 86.2
62 MT-ND3:PHE( H ) - 58 MT-ND3:VAL( O ) 92.8
59 MT-ND3:ALA( H ) - 55 MT-ND3:PHE( O ) 84.6
27 MT-ND3:LEU( H ) - 25 MT-ND3:PRO( O ) 23.8
24 MT-ND3:LEU( H ) - 21 MT-ND3:THR( O ) 69.6
22 MT-ND3:PHE( H ) - 18 MT-ND3:MET( O ) 68.4
21 MT-ND3:THR(HG1) - 17 MT-ND3:LEU( O ) 91.8
21 MT-ND3:THR( H ) - 17 MT-ND3:LEU( O ) 93.2
18 MT-ND3:MET( H ) - 14 MT-ND3:ALA( O ) 82.4
17 MT-ND3:LEU( H ) - 13 MT-ND3:LEU( O ) 94.2
15 MT-ND3:LEU( H ) - 11 MT-ND3:THR( O ) 90.2
14 MT-ND3:ALA( H ) - 10 MT-ND3:ASN( O ) 95.0
13 MT-ND3:LEU( H ) - 9 MT-ND3:THR( O ) 83.0
11 MT-ND3:THR(HG1) - 7 MT-ND3:LEU( O ) 98.0
11 MT-ND3:THR( H ) - 7 MT-ND3:LEU( O ) 83.8
10 MT-ND3:ASN( H ) - 6 MT-ND3:ILE( O ) 98.4
9 MT-ND3:THR(HG1) - 5 MT-ND3:LEU( O ) 98.0
9 MT-ND3:THR( H ) - 5 MT-ND3:LEU( O ) 71.0
7 MT-ND3:LEU( H ) - 3 MT-ND3:PHE( O ) 90.4
6 MT-ND3:ILE( H ) - 3 MT-ND3:PHE( O ) 15.8
6 MT-ND3:ILE( H ) - 2 MT-ND3:ASN( O ) 39.6
5 MT-ND3:LEU( H ) - 2 MT-ND3:ASN( O ) 36.2
5 MT-ND3:LEU( H ) - 2 MT-ND3:ASN(OD1) 10.2
VA305I
Donor-Acceptor Occupancy (%)
318 MT-ND1:THR(HG1) - 318 MT-ND1:THR(OXT) 11.0
318 MT-ND1:THR(HG1) - 318 MT-ND1:THR( O ) 15.8
306 MT-ND1:SER(HG ) - 302 MT-ND1:MET( O ) 92.4
306 MT-ND1:SER( H ) - 302 MT-ND1:MET( O ) 84.6
305 MT-ND1:VAL( H ) - 301 MT-ND1:LEU( O ) 69.8
302 MT-ND1:MET( H ) - 298 MT-ND1:LEU( O ) 89.2
298 MT-ND1:LEU( H ) - 294 MT-ND1:LEU( O ) 95.8
292 MT-ND1:ASN(D21) - 291 MT-ND1:LYS( O ) 57.8
292 MT-ND1:ASN(D21) - 287 MT-ND1:HIS( O ) 18.2
291 MT-ND1:LYS(HZ1) - 287 MT-ND1:HIS(ND1) 10.6
291 MT-ND1:LYS( H ) - 287 MT-ND1:HIS( O ) 64.0
290 MT-ND1:TRP( H ) - 286 MT-ND1:MET( O ) 70.4
287 MT-ND1:HIS( H ) - 283 MT-ND1:ASP( O ) 75.8
286 MT-ND1:MET( H ) - 282 MT-ND1:TYR( O ) 96.8
282 MT-ND1:TYR(HH ) - 134 MT-ND1:ARG( O ) 29.6
222 MT-ND1:LEU( H ) - 219 MT-ND1:PRO( O ) 22.6
155 MT-ND1:LEU( H ) - 151 MT-ND1:LEU( O ) 77.0
151 MT-ND1:LEU( H ) - 147 MT-ND1:ALA( O ) 94.4
148 MT-ND1:ILE( H ) - 144 MT-ND1:VAL( O ) 25.4
147 MT-ND1:ALA( H ) - 143 MT-ND1:GLU( O ) 90.8
144 MT-ND1:VAL( H ) - 140 MT-ND1:ILE( O ) 88.0
141 MT-ND1:SER(HG ) - 290 MT-ND1:TRP(NE1) 76.4
141 MT-ND1:SER(HG ) - 137 MT-ND1:ALA( O ) 97.6
141 MT-ND1:SER( H ) - 137 MT-ND1:ALA( O ) 64.2
137 MT-ND1:ALA( H ) - 133 MT-ND1:LEU( O ) 95.4
134 MT-ND1:ARG(H11) - 115 MT-ND3:GLU(OXT) 11.2
134 MT-ND1:ARG(H11) - 115 MT-ND3:GLU( O ) 51.0
134 MT-ND1:ARG(H11) - 114 MT-ND3:ALA( O ) 38.8
133 MT-ND1:LEU( H ) - 129 MT-ND1:LEU( O ) 96.8
129 MT-ND1:LEU( H ) - 125 MT-ND1:SER( O ) 80.2
125 MT-ND1:SER(HG ) - 127 MT-ND1:TYR( N ) 12.8
124 MT-ND1:ASN( H ) - 121 MT-ND1:TRP( O ) 82.6
104 MT-ND1:PHE( H ) - 100 MT-ND1:LEU( O ) 61.0
103 MT-ND1:LEU( H ) - 100 MT-ND1:LEU( O ) 42.2
96 MT-ND1:VAL( H ) - 87 MT-ND1:THR( O ) 55.6
95 MT-ND1:LEU( H ) - 87 MT-ND1:THR( O ) 43.6
87 MT-ND1:THR(HG1) - 84 MT-ND1:LEU( O ) 11.6
87 MT-ND1:THR( H ) - 84 MT-ND1:LEU( O ) 60.0
84 MT-ND1:LEU( H ) - 80 MT-ND1:THR( O ) 59.4
83 MT-ND1:LEU( H ) - 80 MT-ND1:THR( O ) 25.6
83 MT-ND1:LEU( H ) - 79 MT-ND1:LEU( O ) 54.0
80 MT-ND1:THR(HG1) - 76 MT-ND1:THR( O ) 98.0
80 MT-ND1:THR( H ) - 76 MT-ND1:THR( O ) 79.4
79 MT-ND1:LEU( H ) - 75 MT-ND1:PRO( O ) 92.6
76 MT-ND1:THR(HG1) - 72 MT-ND1:ILE( O ) 97.8
76 MT-ND1:THR( H ) - 72 MT-ND1:ILE( O ) 51.0
71 MT-ND1:TYR(HH ) - 61 MT-ND1:LEU( O ) 25.0
65 MT-ND1:THR(HG1) - 124 MT-ND1:ASN(ND2) 13.8
65 MT-ND1:THR(HG1) - 124 MT-ND1:ASN(OD1) 24.6
64 MT-ND1:ALA( H ) - 34 MT-ND3:SER( O ) 33.8
62 MT-ND1:LYS( H ) - 60 MT-ND1:PRO( O ) 43.8
59 MT-ND1:GLU( H ) - 59 MT-ND1:GLU(OE2) 42.8
59 MT-ND1:GLU( H ) - 59 MT-ND1:GLU(OE1) 43.8
10 MT-ND1:ILE( H ) - 6 MT-ND1:LEU( O ) 96.0
7 MT-ND1:LEU( H ) - 3 MT-ND1:MET( O ) 74.8
6 MT-ND1:LEU( H ) - 2 MT-ND1:PRO( O ) 81.0
106 MT-ND3:TRP( H ) - 102 MT-ND3:LEU( O ) 87.6
102 MT-ND3:LEU( H ) - 98 MT-ND3:LEU( O ) 92.6
99 MT-ND3:ALA( H ) - 95 MT-ND3:ILE( O ) 97.2
96 MT-ND3:ILE( H ) - 92 MT-ND3:LEU( O ) 89.0
95 MT-ND3:ILE( H ) - 91 MT-ND3:SER( O ) 71.8
92 MT-ND3:LEU( H ) - 88 MT-ND3:VAL( O ) 89.6
91 MT-ND3:SER(HG ) - 87 MT-ND3:MET( O ) 92.6
91 MT-ND3:SER( H ) - 87 MT-ND3:MET( O ) 88.6
88 MT-ND3:VAL( H ) - 84 MT-ND3:LEU( O ) 97.6
80 MT-ND3:GLN(E21) - 315 MT-ND1:PRO( O ) 47.8
80 MT-ND3:GLN(E21) - 76 MT-ND3:PRO( O ) 25.8
80 MT-ND3:GLN( H ) - 77 MT-ND3:TRP( O ) 74.4
79 MT-ND3:LEU( H ) - 75 MT-ND3:LEU( O ) 84.0
77 MT-ND3:TRP(HE1) - 318 MT-ND1:THR(OG1) 14.0
75 MT-ND3:LEU( H ) - 72 MT-ND3:LEU( O ) 69.0
73 MT-ND3:LEU( H ) - 69 MT-ND3:ILE( O ) 83.0
72 MT-ND3:LEU( H ) - 69 MT-ND3:ILE( O ) 48.6
69 MT-ND3:ILE( H ) - 65 MT-ND3:PHE( O ) 89.0
66 MT-ND3:ASP( H ) - 62 MT-ND3:PHE( O ) 86.0
65 MT-ND3:PHE( H ) - 61 MT-ND3:THR( O ) 85.0
62 MT-ND3:PHE( H ) - 58 MT-ND3:VAL( O ) 87.4
59 MT-ND3:ALA( H ) - 55 MT-ND3:PHE( O ) 85.8
45 MT-ND3:SER(HG ) - 38 MT-ND3:GLU(OE2) 22.0
45 MT-ND3:SER(HG ) - 38 MT-ND3:GLU(OE1) 18.4
45 MT-ND3:SER( H ) - 38 MT-ND3:GLU(OE2) 29.2
45 MT-ND3:SER( H ) - 38 MT-ND3:GLU(OE1) 27.0
44 MT-ND3:MET( H ) - 38 MT-ND3:GLU(OE2) 27.4
44 MT-ND3:MET( H ) - 38 MT-ND3:GLU(OE1) 26.0
34 MT-ND3:SER(HG ) - 64 MT-ND1:ALA( N ) 25.8
27 MT-ND3:LEU( H ) - 25 MT-ND3:PRO( O ) 36.8
24 MT-ND3:LEU( H ) - 20 MT-ND3:ILE( O ) 90.2
21 MT-ND3:THR(HG1) - 18 MT-ND3:MET( O ) 99.2
21 MT-ND3:THR( H ) - 18 MT-ND3:MET( O ) 45.0
18 MT-ND3:MET( H ) - 14 MT-ND3:ALA( O ) 88.0
17 MT-ND3:LEU( H ) - 13 MT-ND3:LEU( O ) 90.4
15 MT-ND3:LEU( H ) - 11 MT-ND3:THR( O ) 97.0
14 MT-ND3:ALA( H ) - 10 MT-ND3:ASN( O ) 95.0
13 MT-ND3:LEU( H ) - 9 MT-ND3:THR( O ) 87.6
11 MT-ND3:THR(HG1) - 7 MT-ND3:LEU( O ) 90.2
11 MT-ND3:THR( H ) - 7 MT-ND3:LEU( O ) 94.2
10 MT-ND3:ASN(D21) - 6 MT-ND3:ILE( O ) 57.2
10 MT-ND3:ASN( H ) - 6 MT-ND3:ILE( O ) 91.4
9 MT-ND3:THR(HG1) - 5 MT-ND3:LEU( O ) 93.8
9 MT-ND3:THR( H ) - 5 MT-ND3:LEU( O ) 95.0
7 MT-ND3:LEU( H ) - 3 MT-ND3:PHE( O ) 91.4
6 MT-ND3:ILE( H ) - 2 MT-ND3:ASN( O ) 54.8
5 MT-ND3:LEU( H ) - 2 MT-ND3:ASN( O ) 15.0
WT
Donor-Acceptor Occupancy (%)
318 MT-ND1:THR(HG1) - 317 MT-ND1:GLN( O ) 13.8
309 MT-ND1:ILE( H ) - 306 MT-ND1:SER( O ) 44.8
306 MT-ND1:SER(HG ) - 302 MT-ND1:MET( O ) 90.2
306 MT-ND1:SER( H ) - 302 MT-ND1:MET( O ) 50.2
305 MT-ND1:VAL( H ) - 301 MT-ND1:LEU( O ) 81.0
302 MT-ND1:MET( H ) - 298 MT-ND1:LEU( O ) 96.0
298 MT-ND1:LEU( H ) - 294 MT-ND1:LEU( O ) 90.4
292 MT-ND1:ASN(D21) - 287 MT-ND1:HIS( O ) 98.8
291 MT-ND1:LYS(HZ1) - 112 MT-ND3:ASP(OD2) 11.8
291 MT-ND1:LYS(HZ1) - 112 MT-ND3:ASP(OD1) 26.2
291 MT-ND1:LYS(HZ1) - 111 MT-ND3:LEU( O ) 26.8
291 MT-ND1:LYS( H ) - 286 MT-ND1:MET( O ) 59.8
222 MT-ND1:LEU( H ) - 219 MT-ND1:PRO( O ) 65.8
159 MT-ND1:SER( H ) - 154 MT-ND1:LEU( O ) 10.8
155 MT-ND1:LEU( H ) - 151 MT-ND1:LEU( O ) 92.8
151 MT-ND1:LEU( H ) - 147 MT-ND1:ALA( O ) 96.8
148 MT-ND1:ILE( H ) - 144 MT-ND1:VAL( O ) 72.6
147 MT-ND1:ALA( H ) - 143 MT-ND1:GLU( O ) 90.2
144 MT-ND1:VAL( H ) - 140 MT-ND1:ILE( O ) 95.2
141 MT-ND1:SER(HG ) - 290 MT-ND1:TRP(NE1) 59.4
141 MT-ND1:SER(HG ) - 137 MT-ND1:ALA( O ) 82.6
141 MT-ND1:SER( H ) - 137 MT-ND1:ALA( O ) 62.0
137 MT-ND1:ALA( H ) - 133 MT-ND1:LEU( O ) 91.0
134 MT-ND1:ARG(H21) - 115 MT-ND3:GLU(OXT) 52.8
134 MT-ND1:ARG(HE ) - 115 MT-ND3:GLU(OXT) 32.6
133 MT-ND1:LEU( H ) - 129 MT-ND1:LEU( O ) 86.8
129 MT-ND1:LEU( H ) - 125 MT-ND1:SER( O ) 91.8
104 MT-ND1:PHE( H ) - 100 MT-ND1:LEU( O ) 76.2
103 MT-ND1:LEU( H ) - 100 MT-ND1:LEU( O ) 41.4
98 MT-ND1:LEU( H ) - 96 MT-ND1:VAL( O ) 29.6
96 MT-ND1:VAL( H ) - 87 MT-ND1:THR( O ) 76.8
95 MT-ND1:LEU( H ) - 87 MT-ND1:THR( O ) 36.4
87 MT-ND1:THR(HG1) - 84 MT-ND1:LEU( O ) 99.0
87 MT-ND1:THR( H ) - 84 MT-ND1:LEU( O ) 95.6
84 MT-ND1:LEU( H ) - 80 MT-ND1:THR( O ) 86.0
83 MT-ND1:LEU( H ) - 80 MT-ND1:THR( O ) 16.0
83 MT-ND1:LEU( H ) - 79 MT-ND1:LEU( O ) 59.0
80 MT-ND1:THR(HG1) - 76 MT-ND1:THR( O ) 95.6
80 MT-ND1:THR( H ) - 76 MT-ND1:THR( O ) 97.8
79 MT-ND1:LEU( H ) - 75 MT-ND1:PRO( O ) 83.6
76 MT-ND1:THR(HG1) - 72 MT-ND1:ILE( O ) 98.2
76 MT-ND1:THR( H ) - 72 MT-ND1:ILE( O ) 51.0
71 MT-ND1:TYR(HH ) - 124 MT-ND1:ASN(ND2) 21.2
65 MT-ND1:THR(HG1) - 124 MT-ND1:ASN(OD1) 24.0
64 MT-ND1:ALA( H ) - 34 MT-ND3:SER( O ) 11.8
62 MT-ND1:LYS(HZ1) - 63 MT-ND1:PRO( O ) 56.0
62 MT-ND1:LYS( H ) - 60 MT-ND1:PRO( O ) 35.6
59 MT-ND1:GLU( H ) - 59 MT-ND1:GLU(OE2) 27.0
59 MT-ND1:GLU( H ) - 59 MT-ND1:GLU(OE1) 56.0
10 MT-ND1:ILE( H ) - 7 MT-ND1:LEU( O ) 32.0
10 MT-ND1:ILE( H ) - 6 MT-ND1:LEU( O ) 49.0
7 MT-ND1:LEU( H ) - 3 MT-ND1:MET( O ) 79.8
6 MT-ND1:LEU( H ) - 2 MT-ND1:PRO( O ) 81.8
114 MT-ND3:ALA( H ) - 283 MT-ND1:ASP( O ) 24.0
111 MT-ND3:LEU( H ) - 105 MT-ND3:GLU( O ) 38.4
102 MT-ND3:LEU( H ) - 98 MT-ND3:LEU( O ) 96.0
99 MT-ND3:ALA( H ) - 95 MT-ND3:ILE( O ) 98.0
96 MT-ND3:ILE( H ) - 92 MT-ND3:LEU( O ) 91.8
95 MT-ND3:ILE( H ) - 91 MT-ND3:SER( O ) 92.0
92 MT-ND3:LEU( H ) - 88 MT-ND3:VAL( O ) 93.0
91 MT-ND3:SER(HG ) - 87 MT-ND3:MET( O ) 93.4
91 MT-ND3:SER( H ) - 87 MT-ND3:MET( O ) 97.4
88 MT-ND3:VAL( H ) - 84 MT-ND3:LEU( O ) 99.2
80 MT-ND3:GLN(E21) - 315 MT-ND1:PRO( O ) 51.2
80 MT-ND3:GLN( H ) - 77 MT-ND3:TRP( O ) 90.2
79 MT-ND3:LEU( H ) - 75 MT-ND3:LEU( O ) 46.8
75 MT-ND3:LEU( H ) - 72 MT-ND3:LEU( O ) 83.0
73 MT-ND3:LEU( H ) - 69 MT-ND3:ILE( O ) 96.8
72 MT-ND3:LEU( H ) - 69 MT-ND3:ILE( O ) 25.6
69 MT-ND3:ILE( H ) - 65 MT-ND3:PHE( O ) 66.0
66 MT-ND3:ASP( H ) - 62 MT-ND3:PHE( O ) 73.6
65 MT-ND3:PHE( H ) - 62 MT-ND3:PHE( O ) 61.4
65 MT-ND3:PHE( H ) - 61 MT-ND3:THR( O ) 10.2
62 MT-ND3:PHE( H ) - 58 MT-ND3:VAL( O ) 78.6
61 MT-ND3:THR( H ) - 58 MT-ND3:VAL( O ) 10.4
59 MT-ND3:ALA( H ) - 55 MT-ND3:PHE( O ) 94.6
21 MT-ND3:THR(HG1) - 18 MT-ND3:MET( O ) 97.6
21 MT-ND3:THR( H ) - 18 MT-ND3:MET( O ) 93.6
20 MT-ND3:ILE( H ) - 17 MT-ND3:LEU( O ) 34.4
18 MT-ND3:MET( H ) - 14 MT-ND3:ALA( O ) 74.6
17 MT-ND3:LEU( H ) - 13 MT-ND3:LEU( O ) 72.8
15 MT-ND3:LEU( H ) - 11 MT-ND3:THR( O ) 90.8
14 MT-ND3:ALA( H ) - 10 MT-ND3:ASN( O ) 75.2
13 MT-ND3:LEU( H ) - 9 MT-ND3:THR( O ) 89.2
11 MT-ND3:THR(HG1) - 7 MT-ND3:LEU( O ) 95.2
11 MT-ND3:THR( H ) - 7 MT-ND3:LEU( O ) 89.8
10 MT-ND3:ASN(D21) - 6 MT-ND3:ILE( O ) 86.8
10 MT-ND3:ASN( H ) - 6 MT-ND3:ILE( O ) 92.2
9 MT-ND3:THR(HG1) - 5 MT-ND3:LEU( O ) 91.8
9 MT-ND3:THR( H ) - 5 MT-ND3:LEU( O ) 97.0
7 MT-ND3:LEU( H ) - 3 MT-ND3:PHE( O ) 98.0
6 MT-ND3:ILE( H ) - 2 MT-ND3:ASN( O ) 74.0
VA305I-NB10D
Donor-Acceptor Occupancy (%)
317 MT-ND1:GLN(E21) - 315 MT-ND1:PRO( O ) 28.4
317 MT-ND1:GLN( H ) - 317 MT-ND1:GLN(OE1) 10.8
317 MT-ND1:GLN( H ) - 315 MT-ND1:PRO( O ) 11.6
306 MT-ND1:SER(HG ) - 302 MT-ND1:MET( O ) 93.8
306 MT-ND1:SER( H ) - 302 MT-ND1:MET( O ) 78.8
305 MT-ND1:VAL( H ) - 301 MT-ND1:LEU( O ) 78.0
302 MT-ND1:MET( H ) - 298 MT-ND1:LEU( O ) 85.2
298 MT-ND1:LEU( H ) - 294 MT-ND1:LEU( O ) 91.8
292 MT-ND1:ASN(D21) - 291 MT-ND1:LYS( O ) 13.4
291 MT-ND1:LYS(HZ1) - 112 MT-ND3:ASP(OD2) 60.6
291 MT-ND1:LYS(HZ1) - 112 MT-ND3:ASP(OD1) 36.4
291 MT-ND1:LYS( H ) - 287 MT-ND1:HIS( O ) 67.2
290 MT-ND1:TRP( H ) - 286 MT-ND1:MET( O ) 62.8
287 MT-ND1:HIS(HE2) - 112 MT-ND3:ASP(OD2) 26.0
287 MT-ND1:HIS(HE2) - 112 MT-ND3:ASP(OD1) 22.2
287 MT-ND1:HIS( H ) - 283 MT-ND1:ASP( O ) 48.6
286 MT-ND1:MET( H ) - 282 MT-ND1:TYR( O ) 64.6
222 MT-ND1:LEU( H ) - 219 MT-ND1:PRO( O ) 88.6
159 MT-ND1:SER(HG ) - 317 MT-ND1:GLN(OE1) 10.0
155 MT-ND1:LEU( H ) - 151 MT-ND1:LEU( O ) 84.4
151 MT-ND1:LEU( H ) - 147 MT-ND1:ALA( O ) 95.0
148 MT-ND1:ILE( H ) - 144 MT-ND1:VAL( O ) 74.2
147 MT-ND1:ALA( H ) - 143 MT-ND1:GLU( O ) 69.4
141 MT-ND1:SER(HG ) - 282 MT-ND1:TYR(OH ) 15.2
140 MT-ND1:ILE( H ) - 137 MT-ND1:ALA( O ) 29.6
137 MT-ND1:ALA( H ) - 133 MT-ND1:LEU( O ) 84.4
133 MT-ND1:LEU( H ) - 129 MT-ND1:LEU( O ) 96.8
129 MT-ND1:LEU( H ) - 125 MT-ND1:SER( O ) 35.8
126 MT-ND1:ASN(D21) - 45 MT-ND3:SER( O ) 15.4
126 MT-ND1:ASN(D21) - 38 MT-ND3:GLU(OE2) 13.0
125 MT-ND1:SER(HG ) - 214 MT-ND1:GLU(OE2) 12.8
125 MT-ND1:SER(HG ) - 214 MT-ND1:GLU(OE1) 68.0
124 MT-ND1:ASN(D21) - 65 MT-ND1:THR( O ) 12.0
124 MT-ND1:ASN( H ) - 121 MT-ND1:TRP( O ) 84.2
104 MT-ND1:PHE( H ) - 100 MT-ND1:LEU( O ) 77.4
103 MT-ND1:LEU( H ) - 100 MT-ND1:LEU( O ) 22.6
98 MT-ND1:LEU( H ) - 96 MT-ND1:VAL( O ) 13.4
96 MT-ND1:VAL( H ) - 87 MT-ND1:THR( O ) 80.8
95 MT-ND1:LEU( H ) - 87 MT-ND1:THR( O ) 52.0
87 MT-ND1:THR(HG1) - 84 MT-ND1:LEU( O ) 99.2
87 MT-ND1:THR( H ) - 84 MT-ND1:LEU( O ) 96.2
84 MT-ND1:LEU( H ) - 80 MT-ND1:THR( O ) 95.0
83 MT-ND1:LEU( H ) - 80 MT-ND1:THR( O ) 50.8
83 MT-ND1:LEU( H ) - 79 MT-ND1:LEU( O ) 22.8
80 MT-ND1:THR(HG1) - 76 MT-ND1:THR( O ) 37.2
80 MT-ND1:THR( H ) - 76 MT-ND1:THR( O ) 98.2
79 MT-ND1:LEU( H ) - 76 MT-ND1:THR( O ) 42.4
79 MT-ND1:LEU( H ) - 75 MT-ND1:PRO( O ) 27.6
76 MT-ND1:THR(HG1) - 72 MT-ND1:ILE( O ) 65.6
76 MT-ND1:THR( H ) - 72 MT-ND1:ILE( O ) 19.0
71 MT-ND1:TYR(HH ) - 214 MT-ND1:GLU( O ) 94.0
65 MT-ND1:THR(HG1) - 124 MT-ND1:ASN(ND2) 42.2
64 MT-ND1:ALA( H ) - 34 MT-ND3:SER( O ) 23.0
62 MT-ND1:LYS( H ) - 60 MT-ND1:PRO( O ) 14.4
59 MT-ND1:GLU( H ) - 59 MT-ND1:GLU(OE2) 33.2
59 MT-ND1:GLU( H ) - 59 MT-ND1:GLU(OE1) 27.6
10 MT-ND1:ILE( H ) - 6 MT-ND1:LEU( O ) 96.0
7 MT-ND1:LEU( H ) - 3 MT-ND1:MET( O ) 90.6
6 MT-ND1:LEU( H ) - 2 MT-ND1:PRO( O ) 85.4
106 MT-ND3:TRP(HE1) - 112 MT-ND3:ASP(OD1) 10.8
106 MT-ND3:TRP( H ) - 102 MT-ND3:LEU( O ) 88.2
102 MT-ND3:LEU( H ) - 98 MT-ND3:LEU( O ) 82.2
99 MT-ND3:ALA( H ) - 95 MT-ND3:ILE( O ) 94.8
96 MT-ND3:ILE( H ) - 92 MT-ND3:LEU( O ) 90.2
95 MT-ND3:ILE( H ) - 91 MT-ND3:SER( O ) 86.8
92 MT-ND3:LEU( H ) - 88 MT-ND3:VAL( O ) 92.6
91 MT-ND3:SER(HG ) - 87 MT-ND3:MET( O ) 97.4
91 MT-ND3:SER( H ) - 87 MT-ND3:MET( O ) 94.6
88 MT-ND3:VAL( H ) - 84 MT-ND3:LEU( O ) 98.0
80 MT-ND3:GLN(E21) - 315 MT-ND1:PRO( O ) 58.6
80 MT-ND3:GLN(E21) - 76 MT-ND3:PRO( O ) 16.6
80 MT-ND3:GLN( H ) - 77 MT-ND3:TRP( O ) 79.0
79 MT-ND3:LEU( H ) - 76 MT-ND3:PRO( O ) 12.8
79 MT-ND3:LEU( H ) - 75 MT-ND3:LEU( O ) 37.0
75 MT-ND3:LEU( H ) - 72 MT-ND3:LEU( O ) 81.6
72 MT-ND3:LEU( H ) - 69 MT-ND3:ILE( O ) 79.2
69 MT-ND3:ILE( H ) - 66 MT-ND3:ASP( O ) 20.0
65 MT-ND3:PHE( H ) - 62 MT-ND3:PHE( O ) 28.8
62 MT-ND3:PHE( H ) - 59 MT-ND3:ALA( O ) 23.0
62 MT-ND3:PHE( H ) - 58 MT-ND3:VAL( O ) 28.8
61 MT-ND3:THR(HG1) - 58 MT-ND3:VAL( O ) 60.2
61 MT-ND3:THR( H ) - 58 MT-ND3:VAL( O ) 53.4
59 MT-ND3:ALA( H ) - 55 MT-ND3:PHE( O ) 90.8
58 MT-ND3:VAL( H ) - 55 MT-ND3:PHE( O ) 41.2
45 MT-ND3:SER(HG ) - 38 MT-ND3:GLU(OE2) 26.6
45 MT-ND3:SER(HG ) - 38 MT-ND3:GLU(OE1) 18.0
45 MT-ND3:SER( H ) - 38 MT-ND3:GLU(OE2) 19.4
45 MT-ND3:SER( H ) - 38 MT-ND3:GLU(OE1) 24.8
44 MT-ND3:MET( H ) - 38 MT-ND3:GLU(OE2) 19.2
44 MT-ND3:MET( H ) - 38 MT-ND3:GLU(OE1) 26.6
39 MT-ND3:CYS( H ) - 127 MT-ND1:TYR(OH ) 12.2
24 MT-ND3:LEU( H ) - 22 MT-ND3:PHE( O ) 30.6
22 MT-ND3:PHE( H ) - 20 MT-ND3:ILE( O ) 12.2
22 MT-ND3:PHE( H ) - 18 MT-ND3:MET( O ) 33.8
21 MT-ND3:THR(HG1) - 18 MT-ND3:MET( O ) 14.2
21 MT-ND3:THR(HG1) - 17 MT-ND3:LEU( O ) 57.6
21 MT-ND3:THR( H ) - 18 MT-ND3:MET( O ) 10.0
21 MT-ND3:THR( H ) - 17 MT-ND3:LEU( O ) 56.0
18 MT-ND3:MET( H ) - 14 MT-ND3:ALA( O ) 63.6
17 MT-ND3:LEU( H ) - 13 MT-ND3:LEU( O ) 82.6
15 MT-ND3:LEU( H ) - 11 MT-ND3:THR( O ) 69.6
14 MT-ND3:ALA( H ) - 10 MT-ND3:ASN( O ) 97.0
11 MT-ND3:THR(HG1) - 80 MT-ND1:THR(OG1) 39.0
11 MT-ND3:THR(HG1) - 10 MT-ND3:ASN(OD2) 12.6
11 MT-ND3:THR(HG1) - 7 MT-ND3:LEU( O ) 52.4
11 MT-ND3:THR( H ) - 10 MT-ND3:ASN(OD2) 28.2
11 MT-ND3:THR( H ) - 10 MT-ND3:ASN(OD1) 26.4
9 MT-ND3:THR(HG1) - 6 MT-ND3:ILE( O ) 96.8
9 MT-ND3:THR( H ) - 6 MT-ND3:ILE( O ) 96.6
6 MT-ND3:ILE( H ) - 3 MT-ND3:PHE( O ) 52.0
6 MT-ND3:ILE( H ) - 2 MT-ND3:ASN( O ) 17.2
5 MT-ND3:LEU( H ) - 2 MT-ND3:ASN( O ) 28.6